dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001878_25|CGC1
Gene ID: MGYG000001878_01530
Location and strand information: 28933 - 29700 (+)
Family: 2.A.79.2.1
Protein type: TC
Protein description: Inner membrane protein YjjP

Gene clsuter ID: MGYG000001878_25|CGC1
Gene ID: MGYG000001878_01531
Location and strand information: 29697 - 30200 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001878_25|CGC1
Gene ID: MGYG000001878_01532
Location and strand information: 30204 - 30935 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001878_25|CGC1
Gene ID: MGYG000001878_01533
Location and strand information: 31015 - 33054 (-)
Family: GH127|CBM66
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0605
Protein molecular weight: 78178.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001878_25|CGC1
Gene ID: MGYG000001878_01534
Location and strand information: 33071 - 34930 (-)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 5.0906
Protein molecular weight: 69730.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001878_25|CGC1
Gene ID: MGYG000001878_01535
Location and strand information: 34944 - 36491 (-)
Family: GH142
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9403
Protein molecular weight: 59757.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001878_25|CGC1
Gene ID: MGYG000001878_01536
Location and strand information: 36539 - 38158 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001878_25|CGC1
Gene ID: MGYG000001878_01537
Location and strand information: 38171 - 39430 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000001878_25|CGC1
Gene ID: MGYG000001878_01538
Location and strand information: 39381 - 41384 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001878_01530	Inner membrane protein YjjP	TC	28933	29700	+	2.A.79.2.1
MGYG000001878_01531	hypothetical protein	null	29697	30200	+	ThrE_2
MGYG000001878_01532	hypothetical protein	null	30204	30935	+	DUF6064
MGYG000001878_01533	hypothetical protein	CAZyme	31015	33054	-	GH127\| CBM66
MGYG000001878_01534	Non-reducing end beta-L-arabinofuranosidase	CAZyme	33071	34930	-	GH127
MGYG000001878_01535	hypothetical protein	CAZyme	34944	36491	-	GH142
MGYG000001878_01536	hypothetical protein	null	36539	38158	-	SusD-like_3\| SusD_RagB
MGYG000001878_01537	TonB-dependent receptor SusC	TC	38171	39430	-	1.B.14.6.1
MGYG000001878_01538	TonB-dependent receptor SusC	TC	39381	41384	-	1.B.14.6.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature